feat: Page AI Reasonix desktop session alignment, settings IA cleanup, knowledge RAG hardening

- ACP client/session manager: Reasonix desktop live session context
- Hermes tools: knowledge_rag tool manifest and skill updates
- Browser runtime: sidebar page AI permission/profile/render/session/tree modules
- Routes: hermes_client, hermes_tools, knowledge_rag, web_shell
- Scripts: reasonix ACP wrapper, LightRAG MCP, smoke tasks 159/558/559/561/562
- Skills: mnote-knowledge-rag and mnote-lightrag-bridge SKILL.md updates

rust/crates/mnote-web/browser/sidebar-tree-runtime.js

@@ -1684,11 +1684,12 @@ import { createSidebarPageSettingsRuntime } from './sidebar-page-settings-runtim
     }
     var controller = typeof AbortController === 'function' ? new AbortController() : null;
     var timer = 0;
+    var timeout = Math.max(1000, Number(timeoutMs) || 15000);
     try {
       if (controller) {
         timer = window.setTimeout(function() {
           controller.abort();
-        }, Math.max(1000, Number(timeoutMs) || 15000));
+        }, timeout);
       }
       var nextInit = Object.assign({}, init || {});
       if (controller) nextInit.signal = controller.signal;
@@ -1703,6 +1704,16 @@ import { createSidebarPageSettingsRuntime } from './sidebar-page-settings-runtim
     }
   }
 
+  function uploadTimeoutMsForFile(file, requestedMs) {
+    var runtimeFn = localUploadRuntimeFunction('uploadTimeoutMsForFile');
+    if (runtimeFn) return runtimeFn(file, requestedMs);
+    var requested = Number(requestedMs) || 0;
+    var size = Number(file && file.size || 0);
+    if (!Number.isFinite(size) || size <= 0) return Math.max(requested, 15000);
+    var sizeBased = 15000 + Math.ceil(size / (1024 * 1024)) * 12000;
+    return Math.min(10 * 60 * 1000, Math.max(requested, 60000, sizeBased));
+  }
+
   async function insertUploadedAssetIntoEditor(asset, targetRoot) {
     var runtimeFn = localUploadRuntimeFunction('insertUploadedAssetIntoEditor');
     if (runtimeFn) {
@@ -1842,7 +1853,7 @@ import { createSidebarPageSettingsRuntime } from './sidebar-page-settings-runtim
         var localResult = await localUploadRuntime(file, plan, {
           rootUri: rootUri,
           documentId: documentId,
-          timeoutMs: 15000
+          timeoutMs: uploadTimeoutMsForFile(file, 15000)
         });
         localPayload = localResult && localResult.asset ? { asset: localResult.asset } : null;
       } else {
@@ -1857,7 +1868,7 @@ import { createSidebarPageSettingsRuntime } from './sidebar-page-settings-runtim
           method: 'POST',
           credentials: 'include',
           body: localForm
-        }, 15000, '本地上传');
+        }, uploadTimeoutMsForFile(file, 15000), '本地上传');
         localPayload = await localResponse.json().catch(function() { return null; });
         if (!localResponse.ok || !localPayload || !localPayload.asset) {
           throw new Error(localPayload && localPayload.error ? localPayload.error : '上传失败');